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The Neuroscience Information Framework: A - Cornell University
dardized semantic framework and ontology bridging scales and areas. Gupta et al. ... Surveyed the web for neuroscience information resour- ces: databases ...
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Using ontology databases for scalable query answering - Springer
Computer and Information Science DepartmentUniversity of Oregon; National ... using ontologies and data from genetics and neuroscience to illustrate two important ... Ontology Database Knowledge base Scalability Semantic Web ... distributed, heterogeneous ontology databases using an inference-based framework.
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Using ontology databases for scalable query answering - Springer
Sep 22, 2010 ... and neuroscience to illustrate two important applications: first, ... Computer and Information Science Department, ... are using Semantic Web ontologies extensively in intelligent information .... Ontology, is one such kind of knowledge representation framework ... 2004), information search and retrieval (Shah.
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Michael N. Jones - Indiana University Bloomington
Director, IU Cognitive Computing Laboratory: http://compcog.com. 1. ... Affiliated Faculty, Program in Neuroscience ... NSF-CAREER: “Integrating Perceptual and Linguistic Information in Models of Semantic .... Foraging in semantic fields: How we search through memory. .... Towards a scalable holographic representation of .
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Foundations and Frontiers in Visual Analytics - Computer Science
Information Visualization (2009) 8, 239--246. doi:10.1057/ivs.2009.25 ... 2009 Palgrave Macmillan 1473-8716 Information Visualization Vol. 8, 4, 239–246.
[ Information Visualization-2009-Kielman-239-46.pdf - Read/Download File

Paper Title (use style: paper title) - Computer Science and Engineering
amount of time in data intensive computing is spent accessing data on disk. ...... such as NIH's Neuroscience Information Framework (NIF). [31] is projected to ...
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Semantic Web Meets e-Neuroscience: An RDF Use Case
this e-Neuroscience data integration framework, which involves using RDF as a ... neuroscience-related information ranging from the molecular gene level to the ... grow, such a centralized approach to registering resources may not be scalable. ... interface; SenseLab has a structured form search interface; and CoCoDat is.
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Dejing Dou - CIS Users web server - University of Oregon
Jul 11, 2013 ... framework for Semantic Data Mining, Ontology-based Information Extraction, and ... in Biomedical, Business, Network, and Neuroscience data. ... CIS212 Introduction to Computer Science, Spring 2008, Spring 2009. .... “OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target.
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Query-Guided Visual Analysis of Large Volumetric Neuroscience Data
Our application is based on a scalable volume visualization framework that scales to multiple ... e-mail to:[email protected]. ... grated application for the exploration and query-guided visual analysis .... search with ConnectomeExplorer in Table 4 (Sec. ... to dynamic queries in the context of visual analysis and information.
[ connectome_explorer_beyer.pdf - Read/Download File

GeneWeaver: a web-based system for integrative functional genomics
Nov 12, 2011 ... 1School of Engineering & Computer Science, Baylor University, Waco, TX 76798, 2The Jackson Laboratory, ... semantic framework. ... of the Neuroscience Information Framework (NIF) (17), ... analysis with a search for a term or gene of interest. .... complete and scalable, the ability to handle large query.
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Curriculum Vitae
May 26, 2016 ... Department of Mathematics and Computer Science ... Neuroscience (by courtesy ). ... Fellow, Center for the Study of Language and Information (CSLI), Stanford ... tive: Building a Privacy-Preserving Social Networking Platform from a ..... Toward a general, scalable framework for Bayesian teaching with.
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“BIG DATA” WHAT DOES IT MEAN FOR ME? - Center for
Jan 1, 2009 ... Computing and analysis including statistics, data mining and ... Providing the scientists and information analysts with too much of too .... One has to look at and be scalable to 1000s of sites ...... Solr: an enterprise search platform that uses Lucene ... the Neuroscience Information Framework (NIF) Project.
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Building a Web of Linked Data Resources to Advance Neuroscience
May 24, 2016 ... Helen Wills Neuroscience Institute, H. Wheeler Brain Imaging .... The Web offers a scalable and decentralized architecture to support the ... Library Science,” these design principles helped build a library framework that allowed .... semantic information about webpage content that computers can process,.
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Linked Data and Entity Search - Conferences in Research and
Jan 30, 2015 ... between Linked Data, semantic search and search in- terfaces. ... been developed to support the exploration and find- ing of data .... leads to the creation of a common framework that al- lows data to ... and computer clients to discover additional in- .... uses two scalable datasets that reflect generic and spe-.
[ CRPITV166Alahmari.pdf - Read/Download File

Enabling scalable scientific workflow management in the Cloud
within the OpenNebula Cloud platform, the Eucalyptus Cloud platform and Amazon ... ing and application coordination, while Cloud computing offers scalability and resource on-demand. We .... erence service framework for workflow integration and migration ... tracks provenance information [11], and how it deals with errors.
[ 2014_FGCS-cloud-workflow.pdf - Read/Download File

Rethinking Data-Intensive Science Using Scalable - AMPLab
Computational biology; H.1.3.2 [Information Systems]: ... Keywords. Analytics, MapReduce, Genomics, Scientific Computing. 1. ... In fields like neuroscience [18 ] and ... puting and storage platforms are optimized for fast linear .... to provide efficient query semantics across genomic coordi- .... Data exploration tasks have a sig-.
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2014 Annual Report [PDF] - Center for Science of Information
Oct 20, 2014 ... Role: Engage in Education and Research (Semantics and Knowledge Extraction Thrust) .... employs a variety of tools from information theory, computer science, statistics, ... prize winner, and a Swartz prize winner in neuroscience. .... The AGM framework is general enough to use in conjunction with many.
[ CSOI_ANNUAL_REPORT_FINAL_2014_WEB.pdf - Read/Download File

Bio-inspired homogeneous multi-scale place - Boston University
Oct 29, 2015 ... a School of Electrical Engineering and Computer Science, Queensland .... Secondly we propose an improved hierarchical framework to ... discoveries in neuroscience to develop novel multi-scale mapping .... the coarse global information or ''gist'' (Biederman, 1988; Potter, .... 5) to search for the particular.
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NeuroMorpho.Org Implementation of Digital Neuroscience: Dense
interface design allows for optimal and effective data search and retrieval. ... functions enable extensive exploration and discovery, includ- ing 3D and ... sible through the Neuroscience Information Framework. (NIF). ... This organization is scalable, robust, and ... platform and database independent application, is easily.
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Chapter 13 Scientific Process Automation and Workflow Management
13.5.1 ExampleImplementationofaProvenanceFramework . ... covery through advanced computing and information technology, various ..... 4A tool for graphing , advanced computation and exploration of data; see ..... The user interface provides a semantic-search system .... many platforms, and therefore more robust .
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Fiscal Year (FY) 2016 President's Budget Submission
Defense Information Systems Agency. ..... the exploration of the potential of such phenomena for Defense applications. .... future advances in cognitive neuroscience, computing capability, and signal .... Develop and implement scalable algorithms that reveal causality networks in ..... mining semantic patterns in the corpus.
[ (2G1) Global Nav - About Us - Budget - Budget Entries - FY2016 (Approved).pdf - Read/Download File

Nipype: a flexible, lightweight and extensible neuroimaging data
Aug 22, 2011 ... software and usage information; (2) No framework for comparative ... neuroimaging software with uniform usage semantics and by ... exploration of algorithms, eases the design of Workflows within and ... a standalone cross- platform tool (e.g., Mricron), or simply do not ...... tive neuroscience research with.
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